Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ST47_g10454Uncharacterized protein. (720 aa)    
Predicted Functional Partners:
ST47_g9337
Kinase; Belongs to the SKP1 family.
    
 0.997
ST47_g6370
Ubiquitin-dependent protein catabolic process; Belongs to the cullin family.
    
 0.995
ST47_g9348
Zinc ion binding.
    
 0.988
ST47_g3615
Sequence-specific DNA binding.
    
 
 0.977
ST47_g9408
Acid-amino acid ligase; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.971
ST47_g2121
Uncharacterized protein.
    
 0.938
ST47_g2719
ATP binding.
    
 0.935
ST47_g5359
Ubiquitin-dependent protein catabolic process; Belongs to the cullin family.
    
 0.912
ST47_g9497
Sequence-specific DNA binding.
    
 
 0.907
ST47_g6246
Catalytic.
    
   0.796
Your Current Organism:
Ascochyta rabiei
NCBI taxonomy Id: 5454
Other names: A. rabiei, CBS 237.37, Didymella rabiei, Mycosphaerella rabiei, Mycosphaerella rabiei Kovacheski, Phoma rabiei, Zythia rabiei
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