STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ST47_g9142Transmembrane transport. (485 aa)    
Predicted Functional Partners:
ST47_g5871
Polygalacturonase.
    
  0.698
ST47_g4869
Glucanase; Belongs to the glycosyl hydrolase 7 (cellulase C) family.
    
 0.585
ST47_g6834
Hydrolase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 0.530
ST47_g9049
WD_REPEATS_REGION domain-containing protein.
   
 0.517
ST47_g5567
Hydrolase; Belongs to the glycosyl hydrolase 43 family.
   
 0.515
ST47_g2268
Hydrolase.
   
 0.515
ST47_g10070
Ipi1_N domain-containing protein.
    
 0.508
ST47_g7631
Galacturan 1,4-alpha-galacturonidase.
    
 0.497
ST47_g3957
Polygalacturonase.
    
 0.497
ST47_g1594
Polygalacturonase; Belongs to the glycosyl hydrolase 28 family.
    
 0.497
Your Current Organism:
Ascochyta rabiei
NCBI taxonomy Id: 5454
Other names: A. rabiei, CBS 237.37, Didymella rabiei, Mycosphaerella rabiei, Mycosphaerella rabiei Kovacheski, Phoma rabiei, Zythia rabiei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.