STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ST47_g8977Uncharacterized protein. (416 aa)    
Predicted Functional Partners:
ST47_g1727
ATPase.
    
 0.925
ST47_g2515
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
 0.914
ST47_g30
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
 0.914
ST47_g306
ATP binding.
    
 
 0.903
ST47_g2555
WD_REPEATS_REGION domain-containing protein.
    
 0.820
ST47_g9066
ATP binding; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.818
ST47_g3182
Uncharacterized protein.
   
 
 0.817
ST47_g2415
Uncharacterized protein.
    
 
 0.815
ST47_g4596
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.792
ST47_g4464
HORMA domain-containing protein.
   
 0.777
Your Current Organism:
Ascochyta rabiei
NCBI taxonomy Id: 5454
Other names: A. rabiei, CBS 237.37, Didymella rabiei, Mycosphaerella rabiei, Mycosphaerella rabiei Kovacheski, Phoma rabiei, Zythia rabiei
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