STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ST47_g9220Uncharacterized protein. (580 aa)    
Predicted Functional Partners:
ST47_g2766
Uncharacterized protein.
  
 
  0.556
ST47_g131
Flavin adenine dinucleotide binding.
      
 0.503
ST47_g4446
Uncharacterized protein.
  
 
  0.480
ST47_g9423
Uncharacterized protein.
  
 
   0.475
ST47_g4535
Uncharacterized protein.
  
 
   0.454
ST47_g2240
Transport; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
   0.452
ST47_g7226
Uncharacterized protein.
   
 0.451
ST47_g5536
Uncharacterized protein.
   
  0.445
ST47_g9433
Uncharacterized protein.
   
  0.440
ST47_g8964
Uncharacterized protein.
  
 
  0.431
Your Current Organism:
Ascochyta rabiei
NCBI taxonomy Id: 5454
Other names: A. rabiei, CBS 237.37, Didymella rabiei, Mycosphaerella rabiei, Mycosphaerella rabiei Kovacheski, Phoma rabiei, Zythia rabiei
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