STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ST47_g7551Oxidoreductase. (361 aa)    
Predicted Functional Partners:
ST47_g5404
Carboxy-lyase.
 
 
 
 0.796
ST47_g5066
Carboxy-lyase.
 
 
 
 0.796
ST47_g2002
Metal ion binding.
  
 0.776
ST47_g8995
Oxidoreductase; Belongs to the aldehyde dehydrogenase family.
 
 
 
 0.762
ST47_g7044
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
 
 
 
 0.762
ST47_g5763
Catechol O-methyltransferase.
     
 0.753
ST47_g8849
Oxidoreductase; Belongs to the aldehyde dehydrogenase family.
 
 
 
 0.749
ST47_g9309
Oxidoreductase.
   
 
 0.743
ST47_g4669
S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
0.715
ST47_g5621
Oxidoreductase; Belongs to the aldehyde dehydrogenase family.
 
 
 
 0.691
Your Current Organism:
Ascochyta rabiei
NCBI taxonomy Id: 5454
Other names: A. rabiei, CBS 237.37, Didymella rabiei, Mycosphaerella rabiei, Mycosphaerella rabiei Kovacheski, Phoma rabiei, Zythia rabiei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.