Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PAN3 | sts1 | A0A163G6T8 | A0A163CBU8 | PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent 5'-3' exo [...] | Nucleus-associated proteasomal ubiquitin-dependent protein catabolic process; Involved in ubiquitin-mediated protein degradation. Regulatory factor in the ubiquitin/proteasome pathway that controls the turnover of proteasome substrates. Targets proteasomes to the nucleus and facilitates the degradation of nuclear proteins. | 0.913 |
| ST47_g10070 | ST47_g381 | A0A162W190 | A0A163M969 | Ipi1_N domain-containing protein. | Ribosome. | 0.839 |
| ST47_g10070 | ST47_g4184 | A0A162W190 | A0A163G752 | Ipi1_N domain-containing protein. | Structural constituent of ribosome. | 0.837 |
| ST47_g10070 | ST47_g4802 | A0A162W190 | A0A163F051 | Ipi1_N domain-containing protein. | Ribosome. | 0.839 |
| ST47_g10070 | ST47_g6166 | A0A162W190 | A0A163CSC6 | Ipi1_N domain-containing protein. | CLP1_P domain-containing protein. | 0.950 |
| ST47_g10070 | ST47_g6514 | A0A162W190 | A0A163CBR2 | Ipi1_N domain-containing protein. | ATP binding. | 0.678 |
| ST47_g10070 | ST47_g9049 | A0A162W190 | A0A162XWC9 | Ipi1_N domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.998 |
| ST47_g10070 | sts1 | A0A162W190 | A0A163CBU8 | Ipi1_N domain-containing protein. | Nucleus-associated proteasomal ubiquitin-dependent protein catabolic process; Involved in ubiquitin-mediated protein degradation. Regulatory factor in the ubiquitin/proteasome pathway that controls the turnover of proteasome substrates. Targets proteasomes to the nucleus and facilitates the degradation of nuclear proteins. | 0.715 |
| ST47_g1805 | sts1 | A0A163KHL2 | A0A163CBU8 | Exonuclease. | Nucleus-associated proteasomal ubiquitin-dependent protein catabolic process; Involved in ubiquitin-mediated protein degradation. Regulatory factor in the ubiquitin/proteasome pathway that controls the turnover of proteasome substrates. Targets proteasomes to the nucleus and facilitates the degradation of nuclear proteins. | 0.674 |
| ST47_g3247 | ST47_g4184 | A0A163I189 | A0A163G752 | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | Structural constituent of ribosome. | 0.531 |
| ST47_g3247 | sts1 | A0A163I189 | A0A163CBU8 | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | Nucleus-associated proteasomal ubiquitin-dependent protein catabolic process; Involved in ubiquitin-mediated protein degradation. Regulatory factor in the ubiquitin/proteasome pathway that controls the turnover of proteasome substrates. Targets proteasomes to the nucleus and facilitates the degradation of nuclear proteins. | 0.816 |
| ST47_g381 | ST47_g10070 | A0A163M969 | A0A162W190 | Ribosome. | Ipi1_N domain-containing protein. | 0.839 |
| ST47_g381 | ST47_g4184 | A0A163M969 | A0A163G752 | Ribosome. | Structural constituent of ribosome. | 0.996 |
| ST47_g381 | ST47_g4802 | A0A163M969 | A0A163F051 | Ribosome. | Ribosome. | 0.755 |
| ST47_g381 | ST47_g6166 | A0A163M969 | A0A163CSC6 | Ribosome. | CLP1_P domain-containing protein. | 0.675 |
| ST47_g381 | ST47_g6514 | A0A163M969 | A0A163CBR2 | Ribosome. | ATP binding. | 0.818 |
| ST47_g381 | ST47_g9049 | A0A163M969 | A0A162XWC9 | Ribosome. | WD_REPEATS_REGION domain-containing protein. | 0.891 |
| ST47_g381 | sts1 | A0A163M969 | A0A163CBU8 | Ribosome. | Nucleus-associated proteasomal ubiquitin-dependent protein catabolic process; Involved in ubiquitin-mediated protein degradation. Regulatory factor in the ubiquitin/proteasome pathway that controls the turnover of proteasome substrates. Targets proteasomes to the nucleus and facilitates the degradation of nuclear proteins. | 0.707 |
| ST47_g4184 | ST47_g10070 | A0A163G752 | A0A162W190 | Structural constituent of ribosome. | Ipi1_N domain-containing protein. | 0.837 |
| ST47_g4184 | ST47_g3247 | A0A163G752 | A0A163I189 | Structural constituent of ribosome. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.531 |
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