STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ST47_g5280Carbohydrate transport. (412 aa)    
Predicted Functional Partners:
ST47_g3679
Integral component of membrane.
    
 
 0.515
ST47_g9514
Nucleotide-sugar transmembrane transporter.
   
  
 0.509
ST47_g2612
Nucleotide-sugar transmembrane transporter.
      
 0.503
ST47_g3116
Uncharacterized protein.
   
  
 0.500
ST47_g3522
Integral component of membrane.
      
 0.499
ST47_g5249
Sugar:proton symporter.
      
 0.489
ST47_g4631
Alkyl transferase; Belongs to the UPP synthase family.
   
 
 0.428
Your Current Organism:
Ascochyta rabiei
NCBI taxonomy Id: 5454
Other names: A. rabiei, CBS 237.37, Didymella rabiei, Mycosphaerella rabiei, Mycosphaerella rabiei Kovacheski, Phoma rabiei, Zythia rabiei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.