STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ST47_g4662NmrA domain-containing protein. (514 aa)    
Predicted Functional Partners:
ST47_g9169
Catalytic.
    
  0.662
ST47_g5545
PH domain-containing protein.
   
 0.607
ST47_g9126
Acid-amino acid ligase.
   
 0.579
ST47_g7623
Phosphoric diester hydrolase.
   
 0.552
ST47_g8718
ATP binding; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.534
ST47_g6136
Zinc ion binding.
    
 0.510
ST47_g9478
Phosphotransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
  0.506
ST47_g5569
Uncharacterized protein.
    
  0.506
ST47_g4675
Hydrolase.
    
  0.506
ST47_g1810
Uncharacterized protein.
    
  0.506
Your Current Organism:
Ascochyta rabiei
NCBI taxonomy Id: 5454
Other names: A. rabiei, CBS 237.37, Didymella rabiei, Mycosphaerella rabiei, Mycosphaerella rabiei Kovacheski, Phoma rabiei, Zythia rabiei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.