STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ST47_g3402Metal ion binding. (1383 aa)    
Predicted Functional Partners:
ST47_g7315
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.760
ST47_g1515
Uncharacterized protein.
    
 0.545
ST47_g4503
ATP binding.
   
 0.534
ST47_g7369
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
  0.522
ST47_g3667
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.521
ST47_g1760
Uncharacterized protein.
    
 0.513
ST47_g8376
Structural constituent of ribosome.
    
  0.506
ST47_g5659
Nucleic acid binding.
    
  0.505
ST47_g4758
Structural constituent of ribosome.
   
  0.505
ST47_g3884
Structural constituent of ribosome.
   
  0.505
Your Current Organism:
Ascochyta rabiei
NCBI taxonomy Id: 5454
Other names: A. rabiei, CBS 237.37, Didymella rabiei, Mycosphaerella rabiei, Mycosphaerella rabiei Kovacheski, Phoma rabiei, Zythia rabiei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.