STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ST47_g736Uncharacterized protein. (397 aa)    
Predicted Functional Partners:
ST47_g9348
Zinc ion binding.
    
 0.647
ST47_g6370
Ubiquitin-dependent protein catabolic process; Belongs to the cullin family.
    
 0.643
ST47_g5359
Ubiquitin-dependent protein catabolic process; Belongs to the cullin family.
    
 0.643
ST47_g9337
Kinase; Belongs to the SKP1 family.
   
 0.618
ST47_g2121
Uncharacterized protein.
   
 0.618
ST47_g996
Uncharacterized protein.
   
 0.618
ST47_g6943
Ubiquitin-like domain-containing protein.
    
 0.572
ST47_g10575
J domain-containing protein.
    
 0.570
ST47_g9503
Ubiquitin-like domain-containing protein.
    
 0.553
ST47_g2436
Cytoplasm.
    
 0.553
Your Current Organism:
Ascochyta rabiei
NCBI taxonomy Id: 5454
Other names: A. rabiei, CBS 237.37, Didymella rabiei, Mycosphaerella rabiei, Mycosphaerella rabiei Kovacheski, Phoma rabiei, Zythia rabiei
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.