STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ytgP_1Putative cell division protein YtgP. (537 aa)    
Predicted Functional Partners:
CEI80225.1
Ribosome-associated heat shock protein Hsp15.
  
    0.839
mazG
Nucleoside triphosphate pyrophosphohydrolase/pyrophosphatase MazG.
  
    0.817
yabP
Spore protein YabP.
  
  
 0.694
yabQ
Spore protein YabQ.
     
 0.667
yugI_1
General stress protein 13.
 
     0.647
cggR
Central glycolytic genes regulator.
  
    0.611
minJ
Cell division topological determinant MinJ.
  
     0.600
lipC
Spore germination lipase LipC.
  
    0.588
spoVT
Stage V sporulation protein T.
     
 0.563
divIC
Cell division protein DivIC.
       0.534
Your Current Organism:
Oceanobacillus oncorhynchi
NCBI taxonomy Id: 545501
Other names: JCM 12661, NCIMB 14022, O. oncorhynchi, Oceanobacillus oncorhynchi Yumoto et al. 2005 emend. Romano et al. 2006, strain R-2
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.