STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yiaO_22,3-diketo-L-gulonate-binding periplasmic protein YiaO precursor. (341 aa)    
Predicted Functional Partners:
siaT_3
Sialic acid TRAP transporter permease protein SiaT.
  
 0.912
CEI80485.1
2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM.
 
  
 0.837
yiaM
2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM.
 
  
 0.833
siaT_1
Sialic acid TRAP transporter permease protein SiaT.
 
  
 0.828
CEI82936.1
Tripartite ATP-independent periplasmic transporters, DctQ component.
 
  
 0.825
siaT_2
Sialic acid TRAP transporter permease protein SiaT.
  
 0.809
siaT_4
Sialic acid TRAP transporter permease protein SiaT.
  
 0.805
siaT_9
Sialic acid TRAP transporter permease protein SiaT.
  
 0.801
siaT_6
Sialic acid TRAP transporter permease protein SiaT.
  
 0.798
siaT_7
Sialic acid TRAP transporter permease protein SiaT.
     0.779
Your Current Organism:
Oceanobacillus oncorhynchi
NCBI taxonomy Id: 545501
Other names: JCM 12661, NCIMB 14022, O. oncorhynchi, Oceanobacillus oncorhynchi Yumoto et al. 2005 emend. Romano et al. 2006, strain R-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.