STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mcaMycothiol S-conjugate amidase. (227 aa)    
Predicted Functional Partners:
CEI81215.1
Hypothetical protein.
 
    0.989
bshC
Hypothetical protein; Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH.
 
  
 0.914
mshA
D-inositol 3-phosphate glycosyltransferase.
 
 
 0.750
CEI84028.1
Hypothetical protein.
  
   
 0.735
rnmV_2
Ribonuclease M5.
  
     0.625
CEI84417.1
Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG).
  
     0.563
mgsA
Methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate.
  
  
 0.535
CEI81218.1
Membrane protein of unknown function.
       0.527
CEI81217.1
DNA-binding transcriptional activator PspC.
       0.514
CEI83771.1
Glucosaminate ammonia-lyase.
 
   
 0.500
Your Current Organism:
Oceanobacillus oncorhynchi
NCBI taxonomy Id: 545501
Other names: JCM 12661, NCIMB 14022, O. oncorhynchi, Oceanobacillus oncorhynchi Yumoto et al. 2005 emend. Romano et al. 2006, strain R-2
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