Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
CEI81479.1Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ). (181 aa)    
Predicted Functional Partners:
lytH
L-Ala--D-Glu endopeptidase precursor.
       0.787
CEI84157.1
Hypothetical protein.
  
     0.770
CEI81481.1
Hypothetical protein.
  
     0.767
CEI83904.1
Hypothetical protein.
  
     0.767
CEI81487.1
Hypothetical protein.
  
     0.764
CEI80287.1
Hypothetical protein.
  
     0.760
CEI84058.1
Hypothetical protein.
  
     0.757
CEI84413.1
Hypothetical protein.
  
     0.742
CEI84624.1
Hypothetical protein.
  
     0.731
CEI84470.1
Hypothetical protein.
  
     0.729
Your Current Organism:
Oceanobacillus oncorhynchi
NCBI taxonomy Id: 545501
Other names: JCM 12661, NCIMB 14022, O. oncorhynchi, Oceanobacillus oncorhynchi Yumoto et al. 2005 emend. Romano et al. 2006, strain R-2
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