Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CEI81487.1Hypothetical protein. (321 aa)    
Predicted Functional Partners:
CEI83904.1
Hypothetical protein.
  
   
 0.910
spoVID
Stage VI sporulation protein D.
  
   
 0.902
CEI80287.1
Hypothetical protein.
  
  
 0.782
CEI84413.1
Hypothetical protein.
  
  
 0.782
CEI84157.1
Hypothetical protein.
  
    0.775
CEI84412.1
Hypothetical protein.
  
    0.774
CEI83152.1
Hypothetical protein.
  
     0.771
CEI84624.1
Hypothetical protein.
  
     0.771
CEI83491.1
Hypothetical protein.
  
     0.768
yabQ
Spore protein YabQ.
  
     0.766
Your Current Organism:
Oceanobacillus oncorhynchi
NCBI taxonomy Id: 545501
Other names: JCM 12661, NCIMB 14022, O. oncorhynchi, Oceanobacillus oncorhynchi Yumoto et al. 2005 emend. Romano et al. 2006, strain R-2
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