STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
penPBeta-lactamase precursor. (307 aa)    
Predicted Functional Partners:
blaR1
Regulatory protein BlaR1.
 
   
 0.838
pbp_2
Beta-lactam-inducible penicillin-binding protein.
     
 0.763
mecI
Methicillin resistance regulatory protein MecI.
 
   
 0.697
dacC
D-alanyl-D-alanine carboxypeptidase DacC precursor.
  
  
 0.514
gbpA
GlcNAc-binding protein A precursor.
  
     0.467
cwlK
Peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK precursor.
  
  
  0.411
CEI81044.1
Hypothetical protein.
  
     0.403
CEI83293.1
Bacterial membrane flanked domain protein.
  
     0.400
Your Current Organism:
Oceanobacillus oncorhynchi
NCBI taxonomy Id: 545501
Other names: JCM 12661, NCIMB 14022, O. oncorhynchi, Oceanobacillus oncorhynchi Yumoto et al. 2005 emend. Romano et al. 2006, strain R-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.