Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
yxlF_4Putative ABC transporter ATP-binding protein YxlF. (305 aa)    
Predicted Functional Partners:
CEI82271.1
Transcriptional repressor DicA.
 
     0.813
CEI82269.1
ABC-2 family transporter protein.
       0.776
bmrA
Multidrug resistance ABC transporter ATP-binding/permease protein BmrA.
 
 
 
0.517
CEI83568.1
ABC-2 family transporter protein.
  
   0.514
CEI83530.1
ABC-2 family transporter protein.
 
 
 0.477
CEI83306.1
ABC-2 family transporter protein.
 
 
 0.461
CEI82259.1
ABC-2 family transporter protein.
  
   0.445
CEI83619.1
ABC-2 family transporter protein.
 
   0.426
CEI83620.1
ABC-2 family transporter protein.
 
   0.426
ypdB_2
Transcriptional regulatory protein YpdB.
  
     0.413
Your Current Organism:
Oceanobacillus oncorhynchi
NCBI taxonomy Id: 545501
Other names: JCM 12661, NCIMB 14022, O. oncorhynchi, Oceanobacillus oncorhynchi Yumoto et al. 2005 emend. Romano et al. 2006, strain R-2
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