Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
acoA_1Aconitate hydratase. (644 aa)    
Predicted Functional Partners:
icd
Isocitrate dehydrogenase [NADP].
 
 0.971
citA
Citrate synthase 1; Belongs to the citrate synthase family.
  
 0.953
citZ
Citrate synthase 2; Belongs to the citrate synthase family.
  
 0.953
mmgD
2-methylcitrate synthase; Belongs to the citrate synthase family.
  
 0.953
fumC
Fumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
  
 0.899
fadN
Putative 3-hydroxyacyl-CoA dehydrogenase.
   
 0.864
frdB
Fumarate reductase iron-sulfur subunit.
  
 
 0.811
rpmF
50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.
   
  0.790
CEI82560.1
DnaJ central domain protein.
       0.780
atpA
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
   
 0.759
Your Current Organism:
Oceanobacillus oncorhynchi
NCBI taxonomy Id: 545501
Other names: JCM 12661, NCIMB 14022, O. oncorhynchi, Oceanobacillus oncorhynchi Yumoto et al. 2005 emend. Romano et al. 2006, strain R-2
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