Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
gbuC_4Glycine betaine/carnitine transport binding protein GbuC precursor. (318 aa)    
Predicted Functional Partners:
gbuB
Glycine betaine/carnitine transport permease protein GbuB.
 
 0.993
proW
Glycine betaine/L-proline transport system permease protein ProW.
 
 0.981
gbuA
Glycine betaine/carnitine transport ATP-binding protein GbuA.
 
 
 0.935
opuAA
Glycine betaine transport ATP-binding protein OpuAA.
 
 
 0.935
opcR_1
HTH-type transcriptional repressor OpcR; Belongs to the GbsR family.
 
   
 0.859
CEI80808.1
Glycine betaine transporter periplasmic subunit.
  
  
  0.710
gbuC_2
Glycine betaine/carnitine transport binding protein GbuC precursor.
  
  
 
0.667
gbuC_5
Glycine betaine/carnitine transport binding protein GbuC precursor.
  
  
 
0.664
gbuC_1
Glycine betaine/carnitine transport binding protein GbuC precursor.
  
  
 
0.622
potA_3
Spermidine/putrescine import ATP-binding protein PotA; Belongs to the ABC transporter superfamily.
    
  0.548
Your Current Organism:
Oceanobacillus oncorhynchi
NCBI taxonomy Id: 545501
Other names: JCM 12661, NCIMB 14022, O. oncorhynchi, Oceanobacillus oncorhynchi Yumoto et al. 2005 emend. Romano et al. 2006, strain R-2
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