Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
opcR_1HTH-type transcriptional repressor OpcR; Belongs to the GbsR family. (186 aa)    
Predicted Functional Partners:
gbuC_4
Glycine betaine/carnitine transport binding protein GbuC precursor.
 
   
 0.859
CEI84568.1
Scaffold protein Nfu/NifU N terminal.
  
     0.616
gbsA
Betaine aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
     0.614
gbsB
Alcohol dehydrogenase.
 
   
 0.595
CEI80842.1
Hypothetical protein.
  
     0.558
CEI84049.1
Ferritin-like domain protein.
  
     0.550
CEI84155.1
Hypothetical protein; NfeD-like C-terminal, partner-binding.
  
     0.537
CEI80290.1
Hypothetical protein.
  
     0.530
CEI82289.1
Hypothetical protein.
  
     0.525
CEI80312.1
Hypothetical protein.
  
     0.522
Your Current Organism:
Oceanobacillus oncorhynchi
NCBI taxonomy Id: 545501
Other names: JCM 12661, NCIMB 14022, O. oncorhynchi, Oceanobacillus oncorhynchi Yumoto et al. 2005 emend. Romano et al. 2006, strain R-2
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