Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ulaA_3Ascorbate-specific permease IIC component UlaA. (452 aa)    
Predicted Functional Partners:
CEI82596.1
PTS system ascorbate-specific transporter subunits IICB.
 
 
 0.994
mtlR_4
Transcriptional regulator MtlR.
 
  
 0.931
ptsH
Phosphocarrier protein HPr.
    
  0.901
ulaB
Ascorbate-specific phosphotransferase enzyme IIB component.
 
  
 0.852
ulaC
Ascorbate-specific phosphotransferase enzyme IIA component.
 
  
 0.803
licR_6
Putative licABCH operon regulator.
 
  
 0.792
mtlR_2
Transcriptional regulator MtlR.
 
  
 0.736
CEI82080.1
PTS system ascorbate-specific transporter subunits IICB.
 
  
 0.641
licR_1
Putative licABCH operon regulator.
 
  
 0.635
tkt_2
Transketolase; Belongs to the transketolase family.
     
 0.541
Your Current Organism:
Oceanobacillus oncorhynchi
NCBI taxonomy Id: 545501
Other names: JCM 12661, NCIMB 14022, O. oncorhynchi, Oceanobacillus oncorhynchi Yumoto et al. 2005 emend. Romano et al. 2006, strain R-2
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