STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
csoR_3Copper-sensing transcriptional repressor CsoR. (87 aa)    
Predicted Functional Partners:
csoR_1
Copper-sensing transcriptional repressor CsoR.
  
    0.764
csoR_4
Copper-sensing transcriptional repressor CsoR.
  
    0.761
mtlR_1
Transcriptional regulator MtlR.
   
    0.759
csoR_2
Copper-sensing transcriptional repressor CsoR.
  
    0.753
CEI82912.1
Putative glutamine amidotransferasec.
   
    0.660
adhD
Putative alcohol dehydrogenase D.
  
  
 0.596
tehB
Putative S-adenosyl-L-methionine-dependent methyltransferase TehB.
       0.584
moeZ_1
Putative adenylyltransferase/sulfurtransferase MoeZ.
       0.511
fliN
Flagellar motor switch protein FliN.
    
   0.455
glpE_3
Thiosulfate sulfurtransferase GlpE; Belongs to the sulfur carrier protein TusA family.
       0.428
Your Current Organism:
Oceanobacillus oncorhynchi
NCBI taxonomy Id: 545501
Other names: JCM 12661, NCIMB 14022, O. oncorhynchi, Oceanobacillus oncorhynchi Yumoto et al. 2005 emend. Romano et al. 2006, strain R-2
Server load: medium (72%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.