STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEI83079.1Hypothetical protein. (128 aa)    
Predicted Functional Partners:
CEI83255.1
Hypothetical protein.
  
     0.613
CEI82423.1
Hypothetical protein.
  
     0.490
speG_3
Spermidine N(1)-acetyltransferase.
       0.481
CEI81786.1
Hypothetical protein.
  
     0.465
cotF_2
Spore coat protein F precursor.
  
     0.445
dsdA
D-serine dehydratase; Belongs to the serine/threonine dehydratase family. DsdA subfamily.
 
     0.443
CEI80584.1
Enterobactin exporter EntS.
  
     0.442
CEI81982.1
Helix-turn-helix domain protein.
  
     0.439
CEI84058.1
Hypothetical protein.
  
     0.429
CEI84613.1
Membrane transport protein.
  
     0.424
Your Current Organism:
Oceanobacillus oncorhynchi
NCBI taxonomy Id: 545501
Other names: JCM 12661, NCIMB 14022, O. oncorhynchi, Oceanobacillus oncorhynchi Yumoto et al. 2005 emend. Romano et al. 2006, strain R-2
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.