STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEI83108.1Hypothetical protein. (394 aa)    
Predicted Functional Partners:
ylmA
Putative ABC transporter ATP-binding protein YlmA.
       0.768
CEI81519.1
Hypothetical protein.
  
     0.760
CEI84296.1
Flagellar hook-length control protein FliK.
  
     0.756
cna
Collagen adhesin precursor.
  
     0.750
CEI84315.1
Hypothetical protein.
  
     0.749
CEI83992.1
Hypothetical protein.
  
     0.737
CEI81044.1
Hypothetical protein.
  
     0.679
yycH
Two-component system YycF/YycG regulatory protein YycH.
  
     0.668
CEI83724.1
Hypothetical protein.
  
     0.662
CEI80843.1
Hypothetical protein.
  
     0.655
Your Current Organism:
Oceanobacillus oncorhynchi
NCBI taxonomy Id: 545501
Other names: JCM 12661, NCIMB 14022, O. oncorhynchi, Oceanobacillus oncorhynchi Yumoto et al. 2005 emend. Romano et al. 2006, strain R-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.