Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
sphR_2Alkaline phosphatase synthesis transcriptional regulatory protein SphR. (226 aa)    
Predicted Functional Partners:
phoR_4
Alkaline phosphatase synthesis sensor protein PhoR.
 
   0.917
arlS
Signal transduction histidine-protein kinase ArlS.
 
 
 0.863
yycG_3
Sensor histidine kinase YycG.
  
   0.850
phoR_5
Alkaline phosphatase synthesis sensor protein PhoR.
  
   0.847
baeS_1
Signal transduction histidine-protein kinase BaeS.
  
   0.839
walK
Sensor protein kinase WalK.
  
   0.837
baeS_2
Signal transduction histidine-protein kinase BaeS.
  
   0.835
phoR_2
Alkaline phosphatase synthesis sensor protein PhoR.
 
   0.822
phoR_7
Alkaline phosphatase synthesis sensor protein PhoR.
 
 
 0.818
yycG_2
Sensor histidine kinase YycG.
 
 
 0.801
Your Current Organism:
Oceanobacillus oncorhynchi
NCBI taxonomy Id: 545501
Other names: JCM 12661, NCIMB 14022, O. oncorhynchi, Oceanobacillus oncorhynchi Yumoto et al. 2005 emend. Romano et al. 2006, strain R-2
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