STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEI83486.1PRC-barrel domain protein. (239 aa)    
Predicted Functional Partners:
CEI84049.1
Ferritin-like domain protein.
  
  
 0.768
yflT
General stress protein 17M.
  
  
 0.746
katE_3
Catalase HPII; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.702
CEI81786.1
Hypothetical protein.
  
     0.689
opuBB
Choline transport system permease protein OpuBB.
  
    0.684
opuCC
Glycine betaine/carnitine/choline-binding protein OpuCC precursor.
  
    0.683
CEI82681.1
Alpha/beta hydrolase family protein.
  
    0.660
CEI81414.1
Hypothetical protein.
  
    0.637
CEI81690.1
Hypothetical protein.
  
    0.636
CEI84315.1
Hypothetical protein.
  
     0.595
Your Current Organism:
Oceanobacillus oncorhynchi
NCBI taxonomy Id: 545501
Other names: JCM 12661, NCIMB 14022, O. oncorhynchi, Oceanobacillus oncorhynchi Yumoto et al. 2005 emend. Romano et al. 2006, strain R-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.