Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
CEI83552.1Mor transcription activator family protein. (96 aa)    
Predicted Functional Partners:
bltD_1
Spermine/spermidine acetyltransferase.
  
     0.558
tetD_2
Transposon Tn10 TetD protein.
  
     0.527
helD_1
Helicase IV.
  
     0.506
helD_2
Helicase IV.
  
     0.491
ytrF_2
ABC transporter permease YtrF precursor.
  
     0.490
CEI81915.1
Fibronectin-binding protein (FBP).
 
     0.474
CEI81467.1
Hypothetical protein.
  
     0.448
btr
HTH-type transcriptional activator Btr.
  
     0.434
bltD_2
Spermine/spermidine acetyltransferase.
  
     0.410
Your Current Organism:
Oceanobacillus oncorhynchi
NCBI taxonomy Id: 545501
Other names: JCM 12661, NCIMB 14022, O. oncorhynchi, Oceanobacillus oncorhynchi Yumoto et al. 2005 emend. Romano et al. 2006, strain R-2
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