STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bceA_3Bacitracin export ATP-binding protein BceA. (253 aa)    
Predicted Functional Partners:
ytrF_2
ABC transporter permease YtrF precursor.
  
 0.986
CEI83562.1
FtsX-like permease family protein.
 
 0.972
kstR2_3
HTH-type transcriptional repressor KstR2.
 
 
   0.831
CEI80609.1
FtsX-like permease family protein.
 
 0.792
yxdM
ABC transporter permease protein YxdM.
 
 0.718
ubiE_4
Demethylmenaquinone methyltransferase.
       0.671
CEI80564.1
FtsX-like permease family protein.
  
  0.641
mdtA
Multidrug resistance protein MdtA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.629
ytrF_1
ABC transporter permease YtrF precursor.
  
  0.620
bceB_1
Bacitracin export permease protein BceB.
   
  0.615
Your Current Organism:
Oceanobacillus oncorhynchi
NCBI taxonomy Id: 545501
Other names: JCM 12661, NCIMB 14022, O. oncorhynchi, Oceanobacillus oncorhynchi Yumoto et al. 2005 emend. Romano et al. 2006, strain R-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.