STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
buk2Putative butyrate kinase 2; Belongs to the acetokinase family. (364 aa)    
Predicted Functional Partners:
pta
Phosphate acetyltransferase.
 
 0.961
ldh
Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
 
  
 0.950
sucB
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex.
  
  
 0.934
pdhD_1
Dihydrolipoyl dehydrogenase.
 
    0.902
scoA
Putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A.
     
 0.875
scoB
Putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B.
     
 0.858
bfmBAA
2-oxoisovalerate dehydrogenase subunit alpha.
  
  
 0.828
bfmBAB_2
2-oxoisovalerate dehydrogenase subunit beta.
  
  
 0.792
gudB
Cryptic catabolic NAD-specific glutamate dehydrogenase GudB; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
  
 0.623
gdhA
NADP-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
  
 0.623
Your Current Organism:
Oceanobacillus oncorhynchi
NCBI taxonomy Id: 545501
Other names: JCM 12661, NCIMB 14022, O. oncorhynchi, Oceanobacillus oncorhynchi Yumoto et al. 2005 emend. Romano et al. 2006, strain R-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.