STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aacA-aphDBifunctional AAC/APH. (94 aa)    
Predicted Functional Partners:
fadN
Putative 3-hydroxyacyl-CoA dehydrogenase.
  
 0.924
gltA_2
Glutamate synthase [NADPH] large chain.
   
 
 0.752
aroF_2
Phospho-2-dehydro-3-deoxyheptonate aldolase.
    
 0.736
CEI83601.1
Ribosomal-protein-alanine N-acetyltransferase.
 
 
 0.712
accD5
Putative propionyl-CoA carboxylase beta chain 5.
  
 
  0.708
CEI83516.1
Methylmalonyl-CoA carboxyltransferase 12S subunit.
  
 
  0.708
cotX_1
Spore coat protein X.
  
    0.706
cotX_2
Spore coat protein X.
  
    0.704
CEI82502.1
Peptidase propeptide and YPEB domain protein.
  
     0.689
CEI81974.1
Acetyltransferase (GNAT) family protein.
  
 
   0.686
Your Current Organism:
Oceanobacillus oncorhynchi
NCBI taxonomy Id: 545501
Other names: JCM 12661, NCIMB 14022, O. oncorhynchi, Oceanobacillus oncorhynchi Yumoto et al. 2005 emend. Romano et al. 2006, strain R-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.