STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fadR_4Fatty acid metabolism regulator protein. (194 aa)    
Predicted Functional Partners:
etfB
Electron transfer flavoprotein subunit beta.
 
  
 0.808
fadB
Putative enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  
 0.754
lutA_1
Lactate utilization protein A.
 
  
 0.699
fadN
Putative 3-hydroxyacyl-CoA dehydrogenase.
 
  
 0.666
acrA
Acryloyl-CoA reductase electron transfer subunit beta.
 
  
 0.630
fadD
Long-chain-fatty-acid--CoA ligase.
 
    0.603
yvdT
Putative HTH-type transcriptional regulator YvdT.
  
     0.497
fadE
Putative acyl-CoA dehydrogenase.
  
  
 0.479
acuA
Acetoin utilization protein AcuA.
  
     0.453
CEI83943.1
Hypothetical protein.
 
     0.432
Your Current Organism:
Oceanobacillus oncorhynchi
NCBI taxonomy Id: 545501
Other names: JCM 12661, NCIMB 14022, O. oncorhynchi, Oceanobacillus oncorhynchi Yumoto et al. 2005 emend. Romano et al. 2006, strain R-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.