STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEI84028.1Hypothetical protein. (123 aa)    
Predicted Functional Partners:
CEI81215.1
Hypothetical protein.
  
   
 0.738
mca
Mycothiol S-conjugate amidase.
  
   
 0.716
CEI84584.1
Hypothetical protein; Belongs to the UPF0354 family.
  
     0.681
CEI83913.1
Hypothetical protein.
  
     0.667
CEI83703.1
Hypothetical protein.
  
     0.654
CEI84627.1
Hypothetical protein.
  
     0.646
CEI83182.1
Hypothetical protein.
  
     0.635
ytrI
Sporulation membrane protein YtrI.
  
     0.633
CEI84427.1
Hypothetical protein.
  
     0.629
CEI84029.1
Hypothetical protein.
 
     0.627
Your Current Organism:
Oceanobacillus oncorhynchi
NCBI taxonomy Id: 545501
Other names: JCM 12661, NCIMB 14022, O. oncorhynchi, Oceanobacillus oncorhynchi Yumoto et al. 2005 emend. Romano et al. 2006, strain R-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.