STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEI84051.1Bacterial ABC transporter protein EcsB. (406 aa)    
Predicted Functional Partners:
ecsA_4
ABC-type transporter ATP-binding protein EcsA.
 
  
 0.917
CEI84055.1
YtxH-like protein.
 
     0.756
CEI81241.1
Tetratricopeptide repeat.
  
     0.731
divIC
Cell division protein DivIC.
  
     0.717
mecA
Adapter protein MecA 1; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC.
  
     0.713
dnaB
Replication initiation and membrane attachment protein.
  
    0.712
CEI83177.1
Ion channel.
  
     0.692
CEI83716.1
Hypothetical protein.
  
     0.690
CEI84074.1
Hypothetical protein.
  
     0.689
CEI84115.1
Hypothetical protein.
  
     0.689
Your Current Organism:
Oceanobacillus oncorhynchi
NCBI taxonomy Id: 545501
Other names: JCM 12661, NCIMB 14022, O. oncorhynchi, Oceanobacillus oncorhynchi Yumoto et al. 2005 emend. Romano et al. 2006, strain R-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.