Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
mrpG_2Na(+)/H(+) antiporter subunit G. (119 aa)    
Predicted Functional Partners:
mrpA_2
Na(+)/H(+) antiporter subunit A.
 
 
 0.999
mrpE_2
Na(+)/H(+) antiporter subunit E.
 
 
 0.997
mrpF_2
Na(+)/H(+) antiporter subunit F.
 
 
 0.997
mrpA_1
Na(+)/H(+) antiporter subunit A.
 
 
 0.996
mrpC_2
Na(+)/H(+) antiporter subunit C.
 
 
 0.996
mrpD_2
Na(+)/H(+) antiporter subunit D.
 
 
 0.996
mrpB_2
Na(+)/H(+) antiporter subunit B.
 
 
 0.993
mrpE_1
Na(+)/H(+) antiporter subunit E.
 
 
 0.988
mrpF_1
Na(+)/H(+) antiporter subunit F.
 
 
 0.987
mrpD_1
Na(+)/H(+) antiporter subunit D.
 
 
 0.986
Your Current Organism:
Oceanobacillus oncorhynchi
NCBI taxonomy Id: 545501
Other names: JCM 12661, NCIMB 14022, O. oncorhynchi, Oceanobacillus oncorhynchi Yumoto et al. 2005 emend. Romano et al. 2006, strain R-2
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