STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tepATranslocation-enhancing protein TepA. (247 aa)    
Predicted Functional Partners:
clpX_1
ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.
  
 0.957
clpX_2
ATP-dependent Clp protease ATP-binding subunit ClpX.
  
 0.957
clpC
Negative regulator of genetic competence ClpC/MecB; Belongs to the ClpA/ClpB family.
   
 
 0.915
clpE
ATP-dependent Clp protease ATP-binding subunit ClpE; Belongs to the ClpA/ClpB family.
   
 
 0.915
CEI84247.1
Hypothetical protein.
  
  
 0.841
spoIVB
SpoIVB peptidase precursor.
  
  
 0.799
CEI84253.1
PRC-barrel domain protein.
 
     0.797
hrcA
Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.
   
  
 0.789
CEI80759.1
Stage II sporulation protein R (spore_II_R).
  
     0.769
CEI84108.1
Stage III sporulation protein AC/AD protein family protein.
  
     0.768
Your Current Organism:
Oceanobacillus oncorhynchi
NCBI taxonomy Id: 545501
Other names: JCM 12661, NCIMB 14022, O. oncorhynchi, Oceanobacillus oncorhynchi Yumoto et al. 2005 emend. Romano et al. 2006, strain R-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.