STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000708655_00578Unannotated protein. (308 aa)    
Predicted Functional Partners:
GCA_000708655_00566
Unannotated protein.
 
  
 
0.836
GCA_000708655_01762
Unannotated protein.
    
 
 0.584
GCA_000708655_00577
Unannotated protein.
       0.570
GCA_000708655_00565
Unannotated protein.
 
  
 0.541
GCA_000708655_00576
Unannotated protein.
 
    0.504
GCA_000708655_00584
Unannotated protein.
  
  
  0.479
GCA_000708655_00603
Unannotated protein.
 
 
0.466
GCA_000708655_01886
Unannotated protein.
  
  
  0.411
Your Current Organism:
Carnobacterium jeotgali
NCBI taxonomy Id: 545534
Other names: C. jeotgali, Carnobacterium jeotgali Kim et al. 2009, JCM 15539, KCTC 13251, strain MS3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.