STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000708655_01819Unannotated protein. (255 aa)    
Predicted Functional Partners:
GCA_000708655_01818
Unannotated protein.
     0.994
GCA_000708655_01820
Unannotated protein.
      0.976
GCA_000708655_01821
Unannotated protein.
  
    0.856
GCA_000708655_01816
Unannotated protein.
 
    0.854
GCA_000708655_01822
Unannotated protein.
  
    0.821
GCA_000708655_01358
Unannotated protein.
  
  
  0.799
GCA_000708655_01815
Unannotated protein.
  
    0.764
GCA_000708655_01431
Unannotated protein.
  
  
  0.733
GCA_000708655_00188
Unannotated protein.
   
 
  0.687
GCA_000708655_00136
Unannotated protein.
  
 
  0.681
Your Current Organism:
Carnobacterium jeotgali
NCBI taxonomy Id: 545534
Other names: C. jeotgali, Carnobacterium jeotgali Kim et al. 2009, JCM 15539, KCTC 13251, strain MS3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.