STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amiDN-acetylmuramoyl-L-alanine amidase; IMG locus_tag: BAR153v2_005670. (260 aa)    
Predicted Functional Partners:
mltB
Membrane-bound lytic murein transglycosylase B; IMG locus_tag: BAR153v2_001640.
    
 0.729
OPB31277.1
beta-N-acetylhexosaminidase; IMG locus_tag: BAR153v2_002200.
 
  
 0.717
OPB31077.1
NlpC/P60 family protein; IMG locus_tag: BAR153v2_000150.
  
 
 0.661
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
     
 0.655
OPB31679.1
N-acetylmuramoyl-L-alanine amidase; IMG locus_tag: BAR153v2_006380.
     
 0.653
OPB32080.1
Lipoprotein-anchoring transpeptidase ErfK/SrfK; IMG locus_tag: BAR153v2_010490.
     
 0.609
OPB32026.1
Hypothetical protein; IMG locus_tag: BAR153v2_009930.
    
 0.505
Your Current Organism:
Bartonella sp. AR 153
NCBI taxonomy Id: 545617
Other names: B. sp. AR 15-3, Bartonella sp. AR 15-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.