Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OPB31076.1 | OPB31420.1 | BAR153v2_000140 | BAR153v2_003620 | Outer membrane autotransporter barrel domain-containing protein; IMG locus_tag: BAR153v2_000140. | Protein of unknown function (DUF1376); IMG locus_tag: BAR153v2_003650. | 0.772 |
OPB31076.1 | OPB31559.1 | BAR153v2_000140 | BAR153v2_005080 | Outer membrane autotransporter barrel domain-containing protein; IMG locus_tag: BAR153v2_000140. | Phage P22-like portal protein; IMG locus_tag: BAR153v2_005120. | 0.770 |
OPB31076.1 | OPB32166.1 | BAR153v2_000140 | BAR153v2_011410 | Outer membrane autotransporter barrel domain-containing protein; IMG locus_tag: BAR153v2_000140. | Hypothetical protein; IMG locus_tag: BAR153v2_011460. | 0.673 |
OPB31076.1 | OPB32189.1 | BAR153v2_000140 | BAR153v2_011700 | Outer membrane autotransporter barrel domain-containing protein; IMG locus_tag: BAR153v2_000140. | Phage P22-like portal protein; IMG locus_tag: BAR153v2_011750. | 0.773 |
OPB31332.1 | OPB31420.1 | BAR153v2_002740 | BAR153v2_003620 | Outer membrane autotransporter barrel domain-containing protein; IMG locus_tag: BAR153v2_002760. | Protein of unknown function (DUF1376); IMG locus_tag: BAR153v2_003650. | 0.774 |
OPB31332.1 | OPB31559.1 | BAR153v2_002740 | BAR153v2_005080 | Outer membrane autotransporter barrel domain-containing protein; IMG locus_tag: BAR153v2_002760. | Phage P22-like portal protein; IMG locus_tag: BAR153v2_005120. | 0.773 |
OPB31332.1 | OPB32166.1 | BAR153v2_002740 | BAR153v2_011410 | Outer membrane autotransporter barrel domain-containing protein; IMG locus_tag: BAR153v2_002760. | Hypothetical protein; IMG locus_tag: BAR153v2_011460. | 0.689 |
OPB31332.1 | OPB32189.1 | BAR153v2_002740 | BAR153v2_011700 | Outer membrane autotransporter barrel domain-containing protein; IMG locus_tag: BAR153v2_002760. | Phage P22-like portal protein; IMG locus_tag: BAR153v2_011750. | 0.774 |
OPB31420.1 | OPB31076.1 | BAR153v2_003620 | BAR153v2_000140 | Protein of unknown function (DUF1376); IMG locus_tag: BAR153v2_003650. | Outer membrane autotransporter barrel domain-containing protein; IMG locus_tag: BAR153v2_000140. | 0.772 |
OPB31420.1 | OPB31332.1 | BAR153v2_003620 | BAR153v2_002740 | Protein of unknown function (DUF1376); IMG locus_tag: BAR153v2_003650. | Outer membrane autotransporter barrel domain-containing protein; IMG locus_tag: BAR153v2_002760. | 0.774 |
OPB31420.1 | OPB31559.1 | BAR153v2_003620 | BAR153v2_005080 | Protein of unknown function (DUF1376); IMG locus_tag: BAR153v2_003650. | Phage P22-like portal protein; IMG locus_tag: BAR153v2_005120. | 0.774 |
OPB31420.1 | OPB31932.1 | BAR153v2_003620 | BAR153v2_008940 | Protein of unknown function (DUF1376); IMG locus_tag: BAR153v2_003650. | Outer membrane autotransporter barrel domain-containing protein; IMG locus_tag: BAR153v2_008980. | 0.773 |
OPB31420.1 | OPB31933.1 | BAR153v2_003620 | BAR153v2_008950 | Protein of unknown function (DUF1376); IMG locus_tag: BAR153v2_003650. | Outer membrane autotransporter barrel domain-containing protein; IMG locus_tag: BAR153v2_008990. | 0.774 |
OPB31420.1 | OPB32166.1 | BAR153v2_003620 | BAR153v2_011410 | Protein of unknown function (DUF1376); IMG locus_tag: BAR153v2_003650. | Hypothetical protein; IMG locus_tag: BAR153v2_011460. | 0.670 |
OPB31420.1 | OPB32189.1 | BAR153v2_003620 | BAR153v2_011700 | Protein of unknown function (DUF1376); IMG locus_tag: BAR153v2_003650. | Phage P22-like portal protein; IMG locus_tag: BAR153v2_011750. | 0.774 |
OPB31559.1 | OPB31076.1 | BAR153v2_005080 | BAR153v2_000140 | Phage P22-like portal protein; IMG locus_tag: BAR153v2_005120. | Outer membrane autotransporter barrel domain-containing protein; IMG locus_tag: BAR153v2_000140. | 0.770 |
OPB31559.1 | OPB31332.1 | BAR153v2_005080 | BAR153v2_002740 | Phage P22-like portal protein; IMG locus_tag: BAR153v2_005120. | Outer membrane autotransporter barrel domain-containing protein; IMG locus_tag: BAR153v2_002760. | 0.773 |
OPB31559.1 | OPB31420.1 | BAR153v2_005080 | BAR153v2_003620 | Phage P22-like portal protein; IMG locus_tag: BAR153v2_005120. | Protein of unknown function (DUF1376); IMG locus_tag: BAR153v2_003650. | 0.774 |
OPB31559.1 | OPB31932.1 | BAR153v2_005080 | BAR153v2_008940 | Phage P22-like portal protein; IMG locus_tag: BAR153v2_005120. | Outer membrane autotransporter barrel domain-containing protein; IMG locus_tag: BAR153v2_008980. | 0.771 |
OPB31559.1 | OPB31933.1 | BAR153v2_005080 | BAR153v2_008950 | Phage P22-like portal protein; IMG locus_tag: BAR153v2_005120. | Outer membrane autotransporter barrel domain-containing protein; IMG locus_tag: BAR153v2_008990. | 0.773 |
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