STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPB32217.1Biopolymer transport protein ExbD; IMG locus_tag: BAR153v2_012060. (157 aa)    
Predicted Functional Partners:
exbB
Outer membrane transport energization protein ExbB; IMG locus_tag: BAR153v2_012070.
 
 0.999
tolQ
Cell division and transport-associated protein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 0.992
OPB31987.1
Protein TonB; IMG locus_tag: BAR153v2_009530.
  
 0.981
tolA
Cell division and transport-associated protein TolA; IMG locus_tag: BAR153v2_012320.
  
 0.969
hutA
Hemoglobin/transferrin/lactoferrin receptor protein; IMG locus_tag: BAR153v2_009540.
  
 
 0.778
OPB32216.1
Hypothetical protein; IMG locus_tag: BAR153v2_012050.
       0.773
ribA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
   
 
 0.754
omp-2
Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 
 
 0.613
OPB32244.1
TolB protein; IMG locus_tag: BAR153v2_012330.
 
  
 0.528
bamA
Beta-barrel assembly machine subunit BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
     0.525
Your Current Organism:
Bartonella sp. AR 153
NCBI taxonomy Id: 545617
Other names: B. sp. AR 15-3, Bartonella sp. AR 15-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.