node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OPB31469.1 | OPB32318.1 | BAR153v2_004140 | BAR153v2_013010 | Preprotein translocase subunit SecY; IMG locus_tag: BAR153v2_004170. | Signal recognition particle subunit SRP54; IMG locus_tag: BAR153v2_013070. | 0.810 |
OPB31469.1 | ffh | BAR153v2_004140 | BAR153v2_013020 | Preprotein translocase subunit SecY; IMG locus_tag: BAR153v2_004170. | Signal recognition particle subunit FFH/SRP54 (srp54); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the i [...] | 0.810 |
OPB31469.1 | ftsY | BAR153v2_004140 | BAR153v2_013550 | Preprotein translocase subunit SecY; IMG locus_tag: BAR153v2_004170. | Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components. | 0.954 |
OPB31469.1 | rplC | BAR153v2_004140 | BAR153v2_003940 | Preprotein translocase subunit SecY; IMG locus_tag: BAR153v2_004170. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.989 |
OPB31469.1 | rplO | BAR153v2_004140 | BAR153v2_004130 | Preprotein translocase subunit SecY; IMG locus_tag: BAR153v2_004170. | LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.994 |
OPB31469.1 | rplR | BAR153v2_004140 | BAR153v2_004100 | Preprotein translocase subunit SecY; IMG locus_tag: BAR153v2_004170. | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.991 |
OPB31469.1 | secD | BAR153v2_004140 | BAR153v2_007920 | Preprotein translocase subunit SecY; IMG locus_tag: BAR153v2_004170. | Protein translocase subunit secF /protein translocase subunit secD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.999 |
OPB31469.1 | secE | BAR153v2_004140 | BAR153v2_004340 | Preprotein translocase subunit SecY; IMG locus_tag: BAR153v2_004170. | Protein translocase subunit secE/sec61 gamma; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. | 0.993 |
OPB31469.1 | secG | BAR153v2_004140 | BAR153v2_007850 | Preprotein translocase subunit SecY; IMG locus_tag: BAR153v2_004170. | Protein translocase subunit secG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | 0.989 |
OPB31469.1 | secY | BAR153v2_004140 | BAR153v2_004150 | Preprotein translocase subunit SecY; IMG locus_tag: BAR153v2_004170. | Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.981 |
OPB32318.1 | OPB31469.1 | BAR153v2_013010 | BAR153v2_004140 | Signal recognition particle subunit SRP54; IMG locus_tag: BAR153v2_013070. | Preprotein translocase subunit SecY; IMG locus_tag: BAR153v2_004170. | 0.810 |
OPB32318.1 | ffh | BAR153v2_013010 | BAR153v2_013020 | Signal recognition particle subunit SRP54; IMG locus_tag: BAR153v2_013070. | Signal recognition particle subunit FFH/SRP54 (srp54); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the i [...] | 0.773 |
OPB32318.1 | ftsY | BAR153v2_013010 | BAR153v2_013550 | Signal recognition particle subunit SRP54; IMG locus_tag: BAR153v2_013070. | Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components. | 0.990 |
OPB32318.1 | rplC | BAR153v2_013010 | BAR153v2_003940 | Signal recognition particle subunit SRP54; IMG locus_tag: BAR153v2_013070. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.939 |
OPB32318.1 | rplO | BAR153v2_013010 | BAR153v2_004130 | Signal recognition particle subunit SRP54; IMG locus_tag: BAR153v2_013070. | LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.941 |
OPB32318.1 | rplR | BAR153v2_013010 | BAR153v2_004100 | Signal recognition particle subunit SRP54; IMG locus_tag: BAR153v2_013070. | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.933 |
OPB32318.1 | secD | BAR153v2_013010 | BAR153v2_007920 | Signal recognition particle subunit SRP54; IMG locus_tag: BAR153v2_013070. | Protein translocase subunit secF /protein translocase subunit secD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.925 |
OPB32318.1 | secE | BAR153v2_013010 | BAR153v2_004340 | Signal recognition particle subunit SRP54; IMG locus_tag: BAR153v2_013070. | Protein translocase subunit secE/sec61 gamma; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. | 0.921 |
OPB32318.1 | secG | BAR153v2_013010 | BAR153v2_007850 | Signal recognition particle subunit SRP54; IMG locus_tag: BAR153v2_013070. | Protein translocase subunit secG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | 0.916 |
OPB32318.1 | secY | BAR153v2_013010 | BAR153v2_004150 | Signal recognition particle subunit SRP54; IMG locus_tag: BAR153v2_013070. | Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.810 |