STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR79719.1Glycosyl transferase family 2. (232 aa)    
Predicted Functional Partners:
SDR79749.1
N-acetylglucosaminyl deacetylase, LmbE family.
   
 0.981
SDR79774.1
Hypothetical protein.
 
     0.959
SDR79692.1
Glycosyl transferase family 2.
 
     0.802
SDS60091.1
Hypothetical protein.
  
 
 0.795
SDS22777.1
Dolichol-phosphate mannosyltransferase.
  
 
 0.656
SDS32893.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
  
 
  0.648
SDS17402.1
Trehalose 6-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
  
 
  0.634
SDR77692.1
Aryl-phospho-beta-D-glucosidase BglC, GH1 family.
    
 0.626
SDS77906.1
Alpha-1,6-glucosidases, pullulanase-type; Belongs to the glycosyl hydrolase 13 family.
    
 0.605
SDR91400.1
Hypothetical protein.
  
     0.592
Your Current Organism:
Paraoerskovia marina
NCBI taxonomy Id: 545619
Other names: DSM 21750, DSM 22126 [[Koreibacter algae]], JCM 17443 [[Koreibacter algae]], KCTC 13436 [[Koreibacter algae]], Koreibacter algae, Koreibacter algae Lee and Lee 2010, Micrococcineae bacterium DSW-2, NBRC 104352, P. marina, Paraoerskovia marina Khan et al. 2009 emend. Schumann et al. 2013, strain CTT-37, strain DSW-2 [[Koreibacter algae]]
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