STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS10311.1Oxidoreductase molybdopterin binding domain-containing protein. (432 aa)    
Predicted Functional Partners:
SDS10272.1
Hypothetical protein.
 
     0.907
SDS44067.1
Menaquinol-cytochrome c reductase cytochrome c1 subunit precursor.
    
 0.823
SDS10420.1
Methyltransferase domain-containing protein.
 
     0.822
SDS10503.1
Glycosyl transferase family 2.
 
     0.819
SDS10374.1
Hypothetical protein.
       0.804
SDS10463.1
Hypothetical protein.
 
     0.799
SDS11001.1
dTDP-L-rhamnose 4-epimerase.
  
     0.773
SDR93420.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
   
 0.709
tadA
tRNA-adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
       0.527
SDS10865.1
Signal transduction histidine kinase.
 
     0.415
Your Current Organism:
Paraoerskovia marina
NCBI taxonomy Id: 545619
Other names: DSM 21750, DSM 22126 [[Koreibacter algae]], JCM 17443 [[Koreibacter algae]], KCTC 13436 [[Koreibacter algae]], Koreibacter algae, Koreibacter algae Lee and Lee 2010, Micrococcineae bacterium DSW-2, NBRC 104352, P. marina, Paraoerskovia marina Khan et al. 2009 emend. Schumann et al. 2013, strain CTT-37, strain DSW-2 [[Koreibacter algae]]
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