STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS15191.1Hypothetical protein. (520 aa)    
Predicted Functional Partners:
SDS21792.1
Hypothetical protein.
  
     0.768
SDS31640.1
Hypothetical protein.
  
     0.762
SDS80126.1
DNA-binding transcriptional regulator, MerR family.
  
     0.747
SDS17770.1
LytR cell envelope-related transcriptional attenuator.
  
     0.727
SDS21381.1
Hypothetical protein.
  
     0.721
SDS06109.1
Signal transduction histidine kinase.
  
     0.713
SDS55765.1
Ribosomal protein S18 acetylase RimI.
  
     0.703
SDS31601.1
Hypothetical protein.
  
     0.702
SDS39900.1
Alpha/beta hydrolase family protein.
  
     0.697
SDS78281.1
Hypothetical protein.
  
     0.694
Your Current Organism:
Paraoerskovia marina
NCBI taxonomy Id: 545619
Other names: DSM 21750, DSM 22126 [[Koreibacter algae]], JCM 17443 [[Koreibacter algae]], KCTC 13436 [[Koreibacter algae]], Koreibacter algae, Koreibacter algae Lee and Lee 2010, Micrococcineae bacterium DSW-2, NBRC 104352, P. marina, Paraoerskovia marina Khan et al. 2009 emend. Schumann et al. 2013, strain CTT-37, strain DSW-2 [[Koreibacter algae]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.