STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS20967.1Amino acid ABC transporter ATP-binding protein, PAAT family. (262 aa)    
Predicted Functional Partners:
SDS20873.1
Amino acid ABC transporter membrane protein 1, PAAT family.
  0.998
SDS20914.1
Amino acid ABC transporter membrane protein 2, PAAT family.
  0.998
SDS00210.1
Polar amino acid transport system permease protein.
  0.992
SDS64014.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 0.963
SDS64078.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 0.962
SDS75372.1
Amino acid ABC transporter membrane protein, PAAT family.
  0.956
SDS20823.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
  0.940
SDR88526.1
ABC-2 type transport system ATP-binding protein.
 
  
 
0.909
SDS56372.1
ABC-type multidrug transport system, ATPase and permease component.
 
     
0.900
SDS58404.1
ATP-binding cassette, subfamily B.
 
     
0.899
Your Current Organism:
Paraoerskovia marina
NCBI taxonomy Id: 545619
Other names: DSM 21750, DSM 22126 [[Koreibacter algae]], JCM 17443 [[Koreibacter algae]], KCTC 13436 [[Koreibacter algae]], Koreibacter algae, Koreibacter algae Lee and Lee 2010, Micrococcineae bacterium DSW-2, NBRC 104352, P. marina, Paraoerskovia marina Khan et al. 2009 emend. Schumann et al. 2013, strain CTT-37, strain DSW-2 [[Koreibacter algae]]
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