STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS29415.1Aldose 1-epimerase. (303 aa)    
Predicted Functional Partners:
SDS77425.1
Galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
 
 0.984
SDR97898.1
Alpha-galactosidase.
  
 
  0.935
SDR84178.1
Beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
 
 
 0.838
SDS77386.1
UDPglucose--hexose-1-phosphate uridylyltransferase.
  
 0.810
SDS26032.1
Beta-glucosidase.
  
 
 0.655
SDS31020.1
Beta-glucosidase.
  
 
 0.655
SDR97753.1
Beta-galactosidase.
  
 
 0.651
SDS04054.1
Beta-galactosidase.
  
 
 0.651
SDS50966.1
2-haloacid dehalogenase.
   
 
  0.621
SDR78024.1
Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.
    
 0.595
Your Current Organism:
Paraoerskovia marina
NCBI taxonomy Id: 545619
Other names: DSM 21750, DSM 22126 [[Koreibacter algae]], JCM 17443 [[Koreibacter algae]], KCTC 13436 [[Koreibacter algae]], Koreibacter algae, Koreibacter algae Lee and Lee 2010, Micrococcineae bacterium DSW-2, NBRC 104352, P. marina, Paraoerskovia marina Khan et al. 2009 emend. Schumann et al. 2013, strain CTT-37, strain DSW-2 [[Koreibacter algae]]
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