STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS32849.1Predicted dehydrogenase. (389 aa)    
Predicted Functional Partners:
SDS32994.1
Sugar phosphate isomerase/epimerase.
 
 
  0.899
SDS32786.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
 
    0.858
SDR86474.1
Sugar phosphate isomerase/epimerase.
 
 
  0.731
SDS77425.1
Galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
  
 0.696
SDS32616.1
Hypothetical protein.
 
  
  0.685
SDS87305.1
Xylose isomerase.
 
  
  0.681
SDS32741.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
    0.659
SDS19105.1
UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
 
 0.644
SDS32893.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
 
  
  0.597
SDS45564.1
Myo-inositol-1(or 4)-monophosphatase.
    
 0.587
Your Current Organism:
Paraoerskovia marina
NCBI taxonomy Id: 545619
Other names: DSM 21750, DSM 22126 [[Koreibacter algae]], JCM 17443 [[Koreibacter algae]], KCTC 13436 [[Koreibacter algae]], Koreibacter algae, Koreibacter algae Lee and Lee 2010, Micrococcineae bacterium DSW-2, NBRC 104352, P. marina, Paraoerskovia marina Khan et al. 2009 emend. Schumann et al. 2013, strain CTT-37, strain DSW-2 [[Koreibacter algae]]
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