STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS44965.1Hypothetical protein; Manually curated. (75 aa)    
Predicted Functional Partners:
SDS45010.1
DNA topoisomerase IV subunit B; Manually curated.
 
     0.740
SDS70836.1
Superfamily II DNA or RNA helicase.
  
     0.561
SDS45352.1
Hypothetical protein.
  
     0.514
SDS45751.1
Protein of unknown function.
  
     0.514
SDS28485.1
Sporulation and spore germination.
  
     0.451
SDS89438.1
Methyltransferase domain-containing protein; Belongs to the methyltransferase superfamily.
  
     0.447
SDS62970.1
Protein of unknown function.
  
     0.427
SDS44176.1
Hypothetical protein.
  
     0.425
SDS45623.1
Protein of unknown function.
  
     0.420
SDR92972.1
Putative efflux protein, MATE family.
  
     0.415
Your Current Organism:
Paraoerskovia marina
NCBI taxonomy Id: 545619
Other names: DSM 21750, DSM 22126 [[Koreibacter algae]], JCM 17443 [[Koreibacter algae]], KCTC 13436 [[Koreibacter algae]], Koreibacter algae, Koreibacter algae Lee and Lee 2010, Micrococcineae bacterium DSW-2, NBRC 104352, P. marina, Paraoerskovia marina Khan et al. 2009 emend. Schumann et al. 2013, strain CTT-37, strain DSW-2 [[Koreibacter algae]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.