STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS68880.1Hypothetical protein. (314 aa)    
Predicted Functional Partners:
SDR77692.1
Aryl-phospho-beta-D-glucosidase BglC, GH1 family.
    
  0.941
SDS92078.1
5'-nucleotidase.
  
 
 0.837
SDS32893.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
  
 
 0.809
SDS61377.1
SseB protein N-terminal domain-containing protein.
  
 0.750
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
   0.715
SDS83784.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
    
 0.712
SDS64536.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family; Manually curated.
    
   0.699
SDS68928.1
2-hydroxychromene-2-carboxylate isomerase.
       0.554
SDR80818.1
SH3 domain-containing protein.
    
 0.475
SDS18510.1
TLP18.3, Psb32 and MOLO-1 founding protein of phosphatase.
  
 0.457
Your Current Organism:
Paraoerskovia marina
NCBI taxonomy Id: 545619
Other names: DSM 21750, DSM 22126 [[Koreibacter algae]], JCM 17443 [[Koreibacter algae]], KCTC 13436 [[Koreibacter algae]], Koreibacter algae, Koreibacter algae Lee and Lee 2010, Micrococcineae bacterium DSW-2, NBRC 104352, P. marina, Paraoerskovia marina Khan et al. 2009 emend. Schumann et al. 2013, strain CTT-37, strain DSW-2 [[Koreibacter algae]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.