STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS80707.1Probable F420-dependent oxidoreductase, Rv1855c family. (344 aa)    
Predicted Functional Partners:
SDS68624.1
Probable F420-dependent oxidoreductase, Rv3520c family.
  
     0.727
SDS67841.1
F420-dependent oxidoreductase, G6PDH family.
  
     0.726
SDS80402.1
Thiosulfate/3-mercaptopyruvate sulfurtransferase.
    
  0.718
SDS09026.1
NitT/TauT family transport system permease protein.
 
 
  0.710
SDS16481.1
Deazaflavin-dependent oxidoreductase, nitroreductase family.
  
  
 0.707
SDR90578.1
Deazaflavin-dependent oxidoreductase, nitroreductase family.
  
  
 0.673
SDS67768.1
LPPG:FO 2-phospho-L-lactate transferase.
  
   
 0.664
SDS39418.1
FMN reductase.
  
  0.641
SDS67788.1
2-phospho-L-lactate guanylyltransferase.
 
   
 0.622
SDS67828.1
Coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase.
 
     0.611
Your Current Organism:
Paraoerskovia marina
NCBI taxonomy Id: 545619
Other names: DSM 21750, DSM 22126 [[Koreibacter algae]], JCM 17443 [[Koreibacter algae]], KCTC 13436 [[Koreibacter algae]], Koreibacter algae, Koreibacter algae Lee and Lee 2010, Micrococcineae bacterium DSW-2, NBRC 104352, P. marina, Paraoerskovia marina Khan et al. 2009 emend. Schumann et al. 2013, strain CTT-37, strain DSW-2 [[Koreibacter algae]]
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